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A micro-genetic algorithm (μGA) optimization method was applied to a heavy-duty, direct-injected diesel engine via an automated test bed system. The goal of this application was to demonstrate the feasibility and advantages of automated optimization experiments. With the genetic algorithm, no user input was required other than the factors of interest and their allowable ranges. This means that once the routine was initiated, it was essentially run undisturbed until a preset objective level was reached or a preset number of generations had been run. The automated μGA was successfully demonstrated at all points of the six-mode transient cycle simulation, excluding idle. To accomplish the automated experiments, an automated testing system was developed around a Caterpillar single-cylinder diesel engine.