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In internal combustion engines operating in Controlled Auto Ignition (CAI) mode, combustion phasing and heat-release rate is controlled by stratification of fuel, fresh air, and hot internally recirculated exhaust gases. Based on the Representative Interactive Flamelet (RIF) model, a two-dimensional flamelet approach is developed. As independent parameters, firstly the fuel mixture fraction and secondly the mixture fraction of internally recirculated exhaust gases are considered. The flamelet equations are derived from the transport equations for species mass fraction and total enthalpy, employing an asymptotic analysis. A subsequent coordinate transformation leads to the phase space formulation of the two-dimensional flamelet equations. By the use of detailed chemical reaction mechanisms, the effects of dilution, temperature, and chemical species composition due to the internally recirculated exhaust gases are represented.