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An over-expanded spark ignited engine was investigated in this work via engine simulation with a design constrained, mechanically actuated Atkinson cycle mechanism. A conventional 4-stroke spark-ignited turbo-charged engine with a compression ratio of 9.2 and peak brake mean effective pressure of 22 bar was selected for the baseline engine. With geometry and design constraints including bore, stroke, compression ratio, clearance volume at top dead center (TDC) firing, and packaging, one over-expanded engine mechanism with over expansion ratio (OER) of 1.5 was designed. Starting with a validated 1D engine simulation model which included calibration of the in-cylinder heat transfer model and SI turbulent combustion model, investigations of the Atkinson engine including cam optimization was studied. The engine simulation study included the effects of offset of piston TDC locations as well as different durations of the 4-strokes due to the mechanism design.