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Wall-deposition of soot particles occurs during the cylinder liner wall/flame interaction, which can potentially deteriorate engine oil quality and alter the heat loss rate in a diesel engine. These issues motivate a detailed study on structure and size of the wall-deposited soot particles. A morphological difference between the wall-deposited soot and in-flame soot particles is another focus of this study. We performed thermophoretic soot sampling in the cylinder liner wall using an in-liner-type sampler. Obtained soot particles were imaged by a transmission electron microscope and post-processed to acquire the number of particles, projection area on the sampling grid, and size distribution. The same set of data was also obtained for soot particles within the diesel flame using a probe-type sampler.